Package index
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tp_check_input()
- Check input for inference with TreePPL
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tp_compile()
- Compile the TreePPL program
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tp_data()
- Import data for TreePPL program
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tp_json()
- Create a json object
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tp_json_list()
- Convert a json object to json list
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tp_model()
- Import a TreePPL model
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tp_model_names()
- Model names supported by treepplr
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tp_parse()
- Parse simple TreePPL json output
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tp_parse_host_rep()
- Parse TreePPL json output for host repertoire model
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tp_phylo_2_json()
- Convert phylo to json
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tp_run()
- Run a TreePPL program
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tp_stored_compiled()
- List of compiled models in base::tempdir
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tp_stored_data()
- Data file names stored by user in base::tempdir using tp_write
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tp_stored_model()
- Model file names stored by user in base::tempdir using tp_write
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tp_tempdir()
- Temporary directory for running treeppl
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tp_treeppl()
- Compile and run a TreePPL program
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tp_write()
- Prepare input for tp_compile