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Convert TreePPL multi-line JSON to R phylo/multiPhylo object with associated weights

Source: R/data.R
tp_json_to_phylo.Rd

tp_json_to_phylo takes the path to a TreePPL json output and returns an object of class phylo.

Usage

tp_json_to_phylo(json_out)

Arguments

json_out

One of two options:

  • A list of TreePPL output in parsed JSON format (output from tp_run()), OR

  • The full path of the json file containing the TreePPL output.

Value

A list with two elements: $trees: A 'phylo' object (if one tree) or 'multiPhylo' object (if multiple). $weights: A numeric vector of sample weights.