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Convert phylo obj to TreePPL tree

Source: R/tree_convertion.R
tp_phylo_2_TreePPL.Rd

tp_phylo_2_TreePPL takes an object of class phylo and returns a TreePPL json str ready to print in a data file for TreePPL use.

Usage

tp_phylo_2_TreePPL(phylo_tree, age = "")

Arguments

phylo_tree

an object of class ape::phylo.

age

a string that determine the way the age of the node are calculated (default "branch-length").

  • "branch-length" : Root's age = NA, branch-length from the parent branch

  • "top-down" : Root's age = 0.0, cumulative branch-length from root

  • "down-top" : Leaf's age = 0.0, cumulative branch-length from leaf

Value

A TreePPL json str